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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015749.1_12489_30740_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12489 - 30740

Intron Length:

18252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTCAGGCAC

5'SS Class:

weak_major

3'SS Sequence:

TTCTAAACCGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AAATTCTAAACC

Flanking Amino Acid:

FTIFCALPPRNSEILQTKHK

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.08

1.4

48.6

42.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

49.1

-0

1.7

55.8

38.7

Minor 5ss

27.7

-2.6

3.1

30.3

36.4

Minor BPS

60.4

0.31

1.6

66.56

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030041

Chromosome:

PEDO01015749.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011305

3528 - 31181

27654