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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015749.1_2029_30723_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2029 - 30723

Intron Length:

28695

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCACACAAC

5'SS Class:

weak_major

3'SS Sequence:

AATCCAGACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCCCTCCAAAT

Flanking Amino Acid:

STAVENPQAAGNSKPENSEI

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.4

55.1

46.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

47.7

-0.1

1.1

41.9

35.9

Minor 5ss

28.1

-2.5

4.1

42.3

Minor BPS

46.6

-0.1

1.9

67.9

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030041

Chromosome:

PEDO01015749.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028269

1541 - 31181

29641

ENSAPLT00000011178

1411 - 31181

29771