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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015749.1_27420_30717_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27420 - 30717

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

AATACAAATCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTTTTGTTATTT

Flanking Amino Acid:

FGTGTKLIVSNKGNSKPENS

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

57.6

0.17

1.1

44.2

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

50.7

0.1

2.2

75.8

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030041

Chromosome:

PEDO01015749.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047565

3528 - 31181

27654