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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015801.1_2090_2263_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2090 - 2263

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GC-TG

5'SS Sequence:

CTG|GCAGCAGTG

5'SS Class:

major

3'SS Sequence:

GCTACTAGTACTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTAAC

U12 Branch Point Sequence:

GCACCGGTAACT

Flanking Amino Acid:

GTTGSGTGTTGTGTTGTGTT

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.3

58.1

43.6

Major BPS

48.8

-0

1.3

50.7

41.5

Major PPT

38.3

-0.6

3.2

49.9

42.7

Minor 5ss

-2.5

4.5

42.9

46.6

Minor BPS

-0.3

2.5

62.91

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021559

Chromosome:

PEDO01015801.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045757

21 - 3577

3557

ENSAPLT00000039326

21 - 3565

3545

ENSAPLT00000021972

21 - 3565

3545