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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015812.1_1124_1481_F

Intron Information:

Intron Rank:

124385

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1124 - 1481

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGTGCGGA

5'SS Class:

weak_major

3'SS Sequence:

TTTTGGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTGGGTACTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.1

46.1

38.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

86.3

0.82

0.8

80.6

Minor 5ss

38.5

-1.3

3.3

50.9

46.9

Minor BPS

37.4

-1.1

2.9

54.08

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017068

Chromosome:

PEDO01015812.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018380

21 - 2008

1988