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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015828.1_2273_3750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2273 - 3750

Intron Length:

1478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGAT

5'SS Class:

major

3'SS Sequence:

TTTGCACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

AGAGACTTAACC

Flanking Amino Acid:

LAGESNLVTKVKENNISYEL

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

81.9

0.72

0.8

78.3

35.2

Minor 5ss

29.2

-2.4

3.8

49.3

Minor BPS

58.2

0.24

1.6

63.87

40.9

Associated Gene:

Gene:

TRMT5

Ensembl Gene ID:

ENSAPLG00000008002

Chromosome:

PEDO01015828.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028815

1010 - 4959

3950

ENSAPLT00000020228

1010 - 5455

4446

ENSAPLT00000008299

1487 - 5165

3679