Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015833.1_1882_1976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1882 - 1976

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGAC

5'SS Class:

major

3'SS Sequence:

CCCTGTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

AGGCGCTGACCT

Flanking Amino Acid:

RGLPGLRQGLPHQGPQEETK

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

64.5

35.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

70.8

0.47

0.8

63.8

31.4

Minor 5ss

26.3

-2.7

3.3

30.2

37.6

Minor BPS

42.9

-0.4

57.6

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031116

Chromosome:

PEDO01015833.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027306

21 - 3444

3424

ENSAPLT00000042148

21 - 3102

3082