Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015861.1_14023_14139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14023 - 14139

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

GATGTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TGTGACGTCACG

Flanking Amino Acid:

SFAITMATREGNESHALWVV

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

60.3

38.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

71.2

0.48

63.1

42.6

Minor 5ss

28.3

-2.5

3.2

34.6

34.9

Minor BPS

41.1

-0.8

2.5

52.67

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014948

Chromosome:

PEDO01015861.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015567

11604 - 15851

4248