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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015861.1_4403_4854_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4403 - 4854

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

CCTACCCAAACT

Flanking Amino Acid:

QWVDGRSLSLSFWGSGEPNN

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

73.2

38.4

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

63.1

0.44

2.2

75.9

33.6

Minor BPS

48.8

-0

2.1

69.09

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020802

Chromosome:

PEDO01015861.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048422

1092 - 5509

4418