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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015905.1_229_340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

229 - 340

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGCGCT

5'SS Class:

major

3'SS Sequence:

TGCTCCCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TTGCCCTGAGTT

Flanking Amino Acid:

GEIVTTIPTIGFNVETVEYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.1

57.1

42.2

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

66.1

0.36

58.5

38.4

Minor 5ss

32.6

-2

3.6

47.6

Minor BPS

55.8

0.26

1.7

74.61

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030142

Chromosome:

PEDO01015905.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041209

21 - 1859

1839