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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015908.1_1867_1975_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1867 - 1975

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGA|GTGAGTCCC

5'SS Class:
major

3'SS Sequence:
CTGCTGTGCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAC

U12 Branch Point Sequence:
CACCCCTTGCCC

Flanking Amino Acid:
AANGSRVNFGDFNPDPRSRY

Intron Amino Acid Position:
40

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.47
1.1
59.5
39.8

Major BPS
52.1
0.05
1.3
57
41.8

Major PPT
64.9
0.34
1
56.7
43.3

Minor 5ss
31.3
-2.1
2.8
33.6
34.8

Minor BPS
41.7
-0.6
3.4
55.87
42.8

Associated Gene:

Gene:
SLC5A5

Ensembl Gene ID:

Chromosome:
PEDO01015908.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

511 - 6726
6216