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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015908.1_3245_5207_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3245 - 5207

Intron Length:

1963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAAA

5'SS Class:

major

3'SS Sequence:

GTGGGTGCCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

AGAGCCTGGAGG

Flanking Amino Acid:

AARRPTLGVQPLTFSLWDYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

70.9

36.4

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

44.6

-0.3

1.7

42.4

43.2

Minor 5ss

24.7

-2.9

3.1

29.4

43.5

Minor BPS

43.1

-0.6

1.9

42.99

42.1

Associated Gene:

Gene:

SLC5A5

Ensembl Gene ID:

ENSAPLG00000030976

Chromosome:

PEDO01015908.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025298

1972 - 5258

3287