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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015908.1_7231_7423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7231 - 7423

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGCTTTTTACAG

Flanking Amino Acid:

DVENQCHGPISSEFAVNKLK

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

84.6

0.78

0.8

79.2

32.9

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

-0.2

1.8

52.19

42.9

Associated Gene:

Gene:

JAK3

Ensembl Gene ID:

ENSAPLG00000018982

Chromosome:

PEDO01015908.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036623

5336 - 8274

2939