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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015910.1_1276_1574_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1276 - 1574

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAC|GCGCGTTCC

5'SS Class:

weak_major

3'SS Sequence:

GCAGTGCCCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

AAACCCCAAATC

Flanking Amino Acid:

KIHKRTHTGNPSPGTQLGCP

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

61.9

41.4

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

44.8

-0.3

1.6

42.7

38.4

Minor 5ss

-2.8

3.9

34.4

34.5

Minor BPS

45.4

-0.3

1.9

53.5

37.5

Associated Gene:

Gene:

ZIC2

Ensembl Gene ID:

ENSAPLG00000022876

Chromosome:

PEDO01015910.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038811

1069 - 2334

1266