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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015957.1_3561_3752_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3561 - 3752

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGCAAC

5'SS Class:

major

3'SS Sequence:

TCATGGGAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTTCTATT

Flanking Amino Acid:

EYLLKWKGFSEEHNTWEPEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

40.1

Major BPS

100

1.24

0.5

100

Major PPT

53.3

0.08

1.1

46.9

43.9

Minor 5ss

40.9

-1

2.8

48.6

41.6

Minor BPS

61.5

0.44

1.8

83.99

Associated Gene:

Gene:

CBX5

Ensembl Gene ID:

ENSAPLG00000016869

Chromosome:

PEDO01015957.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046648

3383 - 5435

2053