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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015957.1_3934_4982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3934 - 4982

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATT

Flanking Amino Acid:

DDIKAKKKREEGHGRGRPGA

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.2

0.59

0.7

72.2

25.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

71.6

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

CBX5

Ensembl Gene ID:

ENSAPLG00000016869

Chromosome:

PEDO01015957.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046648

3383 - 5435

2053