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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015964.1_1516_1554_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1516 - 1554

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCACCTCC

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ACCTCCTAGATG

Flanking Amino Acid:

GLVLGLPRHLGKCCIDPPTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.4

50.3

41.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

46.2

-0.4

2.6

57.7

41.8

Minor BPS

49.5

-0.1

1.8

51.84

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027453

Chromosome:

PEDO01015964.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031298

701 - 1624

924