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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015969.1_18807_21133_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18807 - 21133

Intron Length:

2327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTTAGTGCA

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GCTCTACTAACG

Flanking Amino Acid:

SLLLQHQPLPAYTIQGQYAI

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.5

58.4

40.8

Major BPS

76.8

0.67

0.9

75.9

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

31.2

-2.2

39.1

Minor BPS

45.3

-0.4

1.9

51.4

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002975

Chromosome:

PEDO01015969.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003068

5985 - 28100

22116