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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016063.1_1715_1941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1715 - 1941

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGACCG

5'SS Class:

major

3'SS Sequence:

TTCTCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGGCAT

U12 Branch Point Sequence:

CTGCCCTGTACT

Flanking Amino Acid:

RLNMKKGAIVKKLWLTLAVQ

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

58.8

40.2

Major BPS

44.4

-0.3

1.5

48.8

46.3

Major PPT

77.1

0.61

0.8

37.1

Minor 5ss

28.5

-2.5

32.2

35.4

Minor BPS

51.9

0.14

1.9

70.49

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021546

Chromosome:

PEDO01016063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030391

21 - 5518

5498

ENSAPLT00000047642

99 - 5518

5420

ENSAPLT00000044091

503 - 5518

5016