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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016063.1_3468_3700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3468 - 3700

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TAACGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GCATCCTCACCC

Flanking Amino Acid:

VLYRRAVLIQRFVQLLDSVL

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

40.1

Major BPS

0.55

71.8

31.4

Major PPT

64.8

0.33

0.9

54.7

40.8

Minor 5ss

38.5

-1.3

3.4

55.3

48.9

Minor BPS

50.7

1.9

60.35

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021546

Chromosome:

PEDO01016063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044091

503 - 5518

5016

ENSAPLT00000030391

21 - 5518

5498

ENSAPLT00000047642

99 - 5518

5420