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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016063.1_3783_3996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3783 - 3996

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGTT

5'SS Class:

major

3'SS Sequence:

CATCCCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

AGGCCTCTAACT

Flanking Amino Acid:

ESIGTFNVLRSMKPFLLLSE

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

72.2

39.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

66.1

0.36

58.1

38.1

Minor 5ss

36.4

-1.5

3.5

47.1

48.3

Minor BPS

54.3

0.21

1.7

69.61

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021546

Chromosome:

PEDO01016063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030391

21 - 5518

5498

ENSAPLT00000047642

99 - 5518

5420

ENSAPLT00000044091

503 - 5518

5016