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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016063.1_760_1097_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

760 - 1097

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

CAGCCCCCCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

GTCCCATTAACA

Flanking Amino Acid:

EQDEAAVRKFRSVPPSWSYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

39.3

Major BPS

69.5

0.49

71.3

30.3

Major PPT

59.1

0.21

0.8

30.4

Minor 5ss

29.8

-2.3

3.5

39.5

45.9

Minor BPS

63.8

0.43

1.6

71.26

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021546

Chromosome:

PEDO01016063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047642

99 - 5518

5420

ENSAPLT00000044091

503 - 5518

5016

ENSAPLT00000030391

21 - 5518

5498