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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016097.1_1444_1996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1444 - 1996

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

CTCCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCATCCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

68.4

0.41

0.8

61.3

29.1

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

51.2

0.02

1.8

59.79

45.1

Associated Gene:

Gene:

LRFN1

Ensembl Gene ID:

ENSAPLG00000016912

Chromosome:

PEDO01016097.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020713

733 - 4652

3920