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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016112.1_1995_2458_F

Intron Information:

Intron Rank:

136304

Intron Class:

major

Intron Phase:

Intron Coordinates:

1995 - 2458

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

CTCACCGGGACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.1

32.8

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

72.5

0.51

65.3

41.1

Minor 5ss

35.6

-1.6

3.1

50.4

45.6

Minor BPS

42.4

-0.7

2.2

47.73

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023443

Chromosome:

PEDO01016112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042958

1258 - 3114

1857