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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016160.1_12384_12945_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12384 - 12945

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GGCCCCGGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

CTTGTCCCACGC

Flanking Amino Acid:

KPATKLAFCKLRDLRHENVN

Intron Amino Acid Position:

812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

-0

1.1

41.7

38.4

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

36.1

-1

2.1

45.95

43.3

Associated Gene:

Gene:

GUCY2D

Ensembl Gene ID:

ENSAPLG00000004449

Chromosome:

PEDO01016160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041608

6924 - 19580

12657

ENSAPLT00000004575

6924 - 19580

12657