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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016160.1_16445_17058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16445 - 17058

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCACGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CATGGCTCACCC

Flanking Amino Acid:

RRVQRADGVRVVVMCMHSVL

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

52.1

0.05

1.3

41.8

Major PPT

67.3

0.39

0.8

61.5

27.7

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

41.8

-0.6

2.2

51.14

45.8

Associated Gene:

Gene:

GUCY2D

Ensembl Gene ID:

ENSAPLG00000004449

Chromosome:

PEDO01016160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041608

6924 - 19580

12657

ENSAPLT00000004575

6924 - 19580

12657