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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016160.1_506_3138_R

Intron Information:

Intron Rank:

129098

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

506 - 3138

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTCGGGG

5'SS Class:

weak_major

3'SS Sequence:

GGTCCCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGGAT

U12 Branch Point Sequence:

GACTTAGGATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.3

43.4

43.9

Major BPS

59.7

0.24

1.5

59.7

46.7

Major PPT

51.6

0.04

1.1

46.1

41.4

Minor 5ss

36.6

-1.5

3.4

47.6

47.9

Minor BPS

35.1

-1.1

2.1

41.85

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016638

Chromosome:

PEDO01016160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026811

21 - 3923

3903