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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016160.1_9037_9521_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9037 - 9521

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGGGTCCC

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

ATTTGGGGAACC

Flanking Amino Acid:

TDKLLTQMLPPSVAEALKMG

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.4

42.8

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

79.4

0.66

0.8

74.1

29.9

Minor 5ss

30.5

-2.2

3.1

40.6

38.6

Minor BPS

-0.7

2.8

61.28

Associated Gene:

Gene:

GUCY2D

Ensembl Gene ID:

ENSAPLG00000004449

Chromosome:

PEDO01016160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041608

6924 - 19580

12657

ENSAPLT00000004575

6924 - 19580

12657