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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_1001_1253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1001 - 1253

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

GCCTCTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

CTGCCCTGACAT

Flanking Amino Acid:

LTKLIMAEKERELAECRKTQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

65.2

0.34

0.9

56.9

38.7

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

-0.1

1.9

63.59

Associated Gene:

Gene:

STUB1

Ensembl Gene ID:

ENSAPLG00000004229

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004354

21 - 3322

3302