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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_1345_1795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1345 - 1795

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CTTCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGGCAA

U12 Branch Point Sequence:

TCTTCCTCTTTC

Flanking Amino Acid:

VQLAGIEAKHDKYLADMDEL

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

66.6

39.6

Major BPS

37.3

-0.8

1.4

34.8

43.8

Major PPT

86.8

0.83

0.7

84.4

23.4

Minor 5ss

-2.4

3.1

33.7

Minor BPS

39.2

-0.8

3.6

62.43

43.5

Associated Gene:

Gene:

STUB1

Ensembl Gene ID:

ENSAPLG00000004229

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004354

21 - 3322

3302