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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_1853_2077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1853 - 2077

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCGAGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CCCTCCTAACCC

Flanking Amino Acid:

LFSQVDEKRKKRDIPDYLCG

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

0.55

71.8

31.4

Major PPT

64.2

0.32

1.1

42.3

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

48.6

-0.1

57.24

47.8

Associated Gene:

Gene:

STUB1

Ensembl Gene ID:

ENSAPLG00000004229

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004354

21 - 3322

3302