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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_2195_2368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2195 - 2368

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCTG

5'SS Class:

major

3'SS Sequence:

TCCTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCGTAAC

U12 Branch Point Sequence:

TGCGGCGTAACC

Flanking Amino Acid:

DRKDIEEHLQRVGHFDPVTR

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

47.7

-0.1

1.4

49.3

42.6

Major PPT

82.5

0.73

0.7

76.6

25.4

Minor 5ss

33.4

-1.9

3.6

47.4

Minor BPS

-0.4

2.4

58.41

46.7

Associated Gene:

Gene:

STUB1

Ensembl Gene ID:

ENSAPLG00000004229

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004354

21 - 3322

3302