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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_341_551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

341 - 551

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

CCATGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGCCAT

U12 Branch Point Sequence:

GGTGCCCCAAGG

Flanking Amino Acid:

EAAAAYGRAINRNPLVAVYY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

61.1

39.6

Major BPS

48.8

-0

1.5

58.2

48.3

Major PPT

65.2

0.34

0.9

57.2

33.2

Minor 5ss

28.1

-2.5

3.1

31.6

36.9

Minor BPS

-0.8

2.2

46.07

45.8

Associated Gene:

Gene:

STUB1

Ensembl Gene ID:

ENSAPLG00000004229

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004354

21 - 3322

3302