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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_3878_3964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3878 - 3964

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

GGGAGCTGAGGC

Flanking Amino Acid:

GYSEVIFGRKRWFLYPPDKT

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

71.1

0.48

61.8

44.4

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

35.4

-1.1

37.59

39.7

Associated Gene:

Gene:

JMJD8

Ensembl Gene ID:

ENSAPLG00000019116

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037529

3570 - 4531

962