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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016212.1_4021_4112_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4021 - 4112

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCACATGG

5'SS Class:

weak_major

3'SS Sequence:

GGCTCGGGTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCTAG

U12 Branch Point Sequence:

CCCTCCCTAGGC

Flanking Amino Acid:

GAYSFGIGGGGVPFHWHGPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.9

0.09

1.4

41.2

44.9

Major BPS

-0.4

1.6

40.4

41.7

Major PPT

58.3

0.19

1.1

53.3

45.9

Minor 5ss

27.5

-2.6

3.8

30.5

42.7

Minor BPS

43.3

-0.5

2.1

50.22

46.5

Associated Gene:

Gene:

JMJD8

Ensembl Gene ID:

ENSAPLG00000019116

Chromosome:

PEDO01016212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037529

3570 - 4531

962