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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016226.1_4195_4599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4195 - 4599

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

TCCCCTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

TCCCCTCTAAGC

Flanking Amino Acid:

VKVHNIVIFMRTSVKLSYIG

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

78.2

0.63

0.7

75.9

26.1

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

46.6

-0.2

1.9

55.94

42.8

Associated Gene:

Gene:

TMEM106C

Ensembl Gene ID:

ENSAPLG00000022157

Chromosome:

PEDO01016226.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036511

3169 - 6731

3563