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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016226.1_5617_6130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5617 - 6130

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTGCCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTGTTTTTGAGC

Flanking Amino Acid:

YSDQRLRPQRTKLYVLLSVL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.3

76.2

39.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

0.63

0.8

Minor 5ss

37.7

-1.4

3.3

48.5

41.2

Minor BPS

58.1

0.24

1.6

68.18

38.4

Associated Gene:

Gene:

TMEM106C

Ensembl Gene ID:

ENSAPLG00000022157

Chromosome:

PEDO01016226.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036511

3169 - 6731

3563