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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016241.1_2741_2819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2741 - 2819

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

CTCCCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCAAC

U12 Branch Point Sequence:

CCTGCACCAACA

Flanking Amino Acid:

TRCPPPGTSCRNCLLPPVAP

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

57.1

42.2

Major BPS

46.8

-0.2

1.1

30.4

Major PPT

78.8

0.65

0.7

72.8

25.4

Minor 5ss

31.7

-2.1

3.3

39.7

45.8

Minor BPS

42.2

-0.5

2.1

53.29

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029180

Chromosome:

PEDO01016241.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042384

1058 - 5076

4019

ENSAPLT00000035599

1344 - 5076

3733