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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016241.1_3879_3960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3879 - 3960

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CGCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

AATGTTTTATTT

Flanking Amino Acid:

NNINRSLLALGHCISLLAKP

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

67.8

0.4

0.8

29.2

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

50.4

0.09

1.6

66.33

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029180

Chromosome:

PEDO01016241.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042384

1058 - 5076

4019