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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016261.1_1597_1728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1597 - 1728

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCCCACGGGACG

Flanking Amino Acid:

SSCGNRSRRWRRPLPSSPSD

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

35.5

-1.2

2.1

33.25

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028469

Chromosome:

PEDO01016261.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018462

464 - 2823

2360