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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016261.1_602_696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

602 - 696

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTTTCTGACGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

0.4

0.9

38.5

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

46.5

-0.4

56.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028469

Chromosome:

PEDO01016261.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018462

464 - 2823

2360