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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016268.1_261_493_R

Intron Information:

Intron Rank:

143201

Intron Class:

major

Intron Phase:

Intron Coordinates:

261 - 493

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

ATGGCCCAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

78.3

0.64

76.2

37.8

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

44.3

-0.5

2.1

49.88

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024391

Chromosome:

PEDO01016268.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045661

21 - 1257

1237