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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016268.1_519_783_R

Intron Information:

Intron Rank:

143202

Intron Class:

major

Intron Phase:

Intron Coordinates:

519 - 783

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

TGCGCCTCAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

87.3

0.84

0.7

84.9

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

48.4

-0.1

1.9

59.35

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024391

Chromosome:

PEDO01016268.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045661

21 - 1257

1237