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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016275.1_1325_1419_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1325 - 1419

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

GTGTCCGTCCCC

Flanking Amino Acid:

LGLALSCRGAGAFVMHMASS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

54.2

0.09

1.1

49.4

39.3

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

35.3

-1.1

3.8

58.38

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022573

Chromosome:

PEDO01016275.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023877

280 - 4493

4214