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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016332.1_1340_3541_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1340 - 3541

Intron Length:

2202

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAATCCAG

5'SS Class:

major

3'SS Sequence:

CCCTGGTGACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TAGCCCCCAGCC

Flanking Amino Acid:

LGLLGCSTLRAGCFDEPRPG

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

47.6

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

57.6

0.17

1.1

49.6

42.8

Minor 5ss

27.1

-2.6

3.9

35.4

42.3

Minor BPS

43.5

-0.5

54.77

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024675

Chromosome:

PEDO01016332.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028790

1146 - 47673

46528