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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016337.1_1278_1764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278 - 1764

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATGGCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGATGAGGAATG

Flanking Amino Acid:

PLQTGQQLSKAEEWLLKKTC

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.2

36.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

73.5

0.53

66.2

40.1

Minor 5ss

33.1

-1.9

37.7

Minor BPS

36.2

-1.1

2.4

43.07

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029953

Chromosome:

PEDO01016337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025915

294 - 3495

3202