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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016337.1_9500_9791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9500 - 9791

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

TGCTTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCTCACGGGACC

Flanking Amino Acid:

GSLEEDWKATRVGRNIFTRK

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

79.9

0.67

0.8

73.7

31.3

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

42.6

-0.6

2.2

57.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020170

Chromosome:

PEDO01016337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024133

9400 - 11309

1910