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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016363.1_1523_1678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1523 - 1678

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCGG

5'SS Class:

major

3'SS Sequence:

TCCCCGTCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAT

U12 Branch Point Sequence:

AGGGGGTGACAT

Flanking Amino Acid:

MNDKGNGHEKVDYFNGARLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

48.7

47.2

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

74.2

0.54

0.8

64.7

36.5

Minor 5ss

28.4

-2.5

3.5

38.7

46.4

Minor BPS

29.9

-1.4

2.2

40.67

41.2

Associated Gene:

Gene:

HAPLN3

Ensembl Gene ID:

ENSAPLG00000029390

Chromosome:

PEDO01016363.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045066

766 - 3306

2541

ENSAPLT00000042164

766 - 3306

2541

ENSAPLT00000011704

21 - 3306

3286