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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016363.1_2051_2531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2051 - 2531

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGACC

5'SS Class:

major

3'SS Sequence:

GTCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TGTCATCTGAGT

Flanking Amino Acid:

ESDVVDLRLQGVVFPYQPPR

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

35.3

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

68.4

0.41

0.9

58.3

38.5

Minor 5ss

26.7

-2.7

3.2

34.1

41.8

Minor BPS

-0.4

63.25

40.7

Associated Gene:

Gene:

HAPLN3

Ensembl Gene ID:

ENSAPLG00000029390

Chromosome:

PEDO01016363.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045066

766 - 3306

2541

ENSAPLT00000042164

766 - 3306

2541

ENSAPLT00000011704

21 - 3306

3286