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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016363.1_2835_3024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2835 - 3024

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCATCCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

ATTTCTTCCATC

Flanking Amino Acid:

DVFCFSSALRGEIFYLEPPA

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

0.37

1.3

76.1

Major PPT

66.6

0.37

0.8

32.9

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

51.9

0.04

1.9

68.59

37.5

Associated Gene:

Gene:

HAPLN3

Ensembl Gene ID:

ENSAPLG00000029390

Chromosome:

PEDO01016363.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045066

766 - 3306

2541